Running Python code

If I would like to try out some Python code, for example a hello world program, then where should I put it? There are three methods of running Python code:

  • IPython (interactive)
  • Jupyter Notebook (interactive)
  • running the program code from a text file (non-interactive)

IPython

If you just quickly want to try out something, then maybe the easiest option is to use the IPython interactive shell. To do this, first start the terminal program to get a command prompt. Then give the command ipython3 and press enter. Then you can write Python commands and execute them by pressing enter. Note that IPython supports tab completion. Try this out by first writing pri and then pressing the tabulator key. It should complete the command to print. IPython can tab complete keywords; function, module, method, and variable names, and so on. You can quit the the IPython shell by given the command exit and pressing enter.

The following video will show an example session of using IPython.

Jupyter notebook

Again in the command prompt, issue command jupyter-notebook. It should start the Jupyter server and open a tab in the web browser that is connected to the server. There you can click the new button and select Python 3. Click on the cell, write your Python code there, and execute it by pressing control-enter. You can check the following video for introduction to Jupyter notebook:

The material of this course was written as Jupyter notebooks, and then rendered as html pages, which you are reading now. While the static html pages do not allow modification of pieces of Python code, you can click the ‘open in colab’ link at the top of the page to open the notebook in Google’s colab service. There it is possible to edit code and re-execute it.

Alternatively, you can download the notebooks with command git clone https://github.com/csmastersUH/data_analysis_with_python_2020. Then start Jupyter notebook with command jupyter-notebook.

Executing a file containing Python code

In your favorite text editor write some Python code, and save it to a file with .py extension, for example myprogram.py. Then you can execute the program with the command python3 myprogram.py. In all the exercises of this course you write your solution to a text file (a stub file is provided where you can add the missing pieces). To run your solution to an exercise, for example the “hello world” exercise, use python3 src/hello_world.py. This of course depends on what is your current folder.

If you are running some unix based operation system, like Linux or macOS, you can make the file directly executable in the following way. Add as the first line of you program the line #!/usr/bin/env python and on command line issue command chmod u+x myprogram.py. Then you can execute the file from command line with ./myprogram.py.

Correct software versions

It can be that the command python still refers to the old python2 version. This course relies completely on a newer python version. Therefore you may need to use the command python3 to be sure the old version python2 is not used. You can check the version number with the --version option. For example in the following way:

saskeli@dx5-cs-01:$ python --version
Python 2.7.15rc1
saskeli@dx5-cs-01:$ python3 --version
Python 3.6.7

If you have Anaconda correctly installed, then the Python version should be new enough and python command should refer to python3, not python2.

The Python version should be at least 3.6. The exercises may work with slightly older python versions as well, but you may run into issues with the exercise templates and tests.

The versions of additional libraries that are know to work are:

Library Version
numpy 1.13.3
pandas 0.23.0
matplotlib 2.1.1
scikit-learn 0.19.1
scipy 0.19.1
seaborn 0.8.0
jupyter 1.0.0

More recent versions should work as well. You can check the software version of your installation with the following Python script: versions.py Download the script and execute it with python versions.py.